Tuesday, December 2, 2008

Final Report on Aquarium Findings!!!!

’10,000 Amoebas’’ MicroAquarium Observatory Report

Matthew Ben Trest – November 24, 2008

Blog Info: R0ver, “10,000 Amoebas Under the Sea” <http://10000ameobas.blogspot.com/>

Introduction

The overall purpose of viewing a controlled water environment is so that the general ideas learned in lectures may be seen on a diverse and dynamic scale (University of Alabama). Each student was to create their own varied MicroAquarium with a selected water source and placed plant life, view over a period of four weeks, and determine changes which may occur in a diverse environment. Findings should be able to determine different life species, some idea of a life cycle for an organism, and what the growth or mortality rate in the aquarium is.

Materials and Methods

A MicroAquarium (produced by the Carolina Biological Supply Company) is labeled with colored dots and initials to identify the environment from others in the class. Then once labeled appropriately, water from a natural spring in Fountain City Park is stirred using a pipette and transferred into the MicroAquarium. The water is transferred in three distinct layers of bottom substrate, middle water, and top water in order to promote diversity within the tank. Also, plant life in the form of a moss Rhynchostegium serrulatum, and the carnivorous Utricularia vulgaris was added by personal choice, to perhaps promote relationships between organisms (University of Alabama, Habitats and Pond Water). Each aquarium is stored in a plastic container where it is retrieved each week to be observed and studied. In four successive weeks the MicroAquarium is to be observed under microscope, naked eye, and hand lens for organisms and habitat changes. Also, pictures were taken using a special microscope; these are shown and described at the end of the report. Notes and observations are continued through each week to track progress and perhaps the establishment of new organisms within the aquarium, different species are to be identified and sourced.

Results

The initial observation of the aquarium did not reveal much under a hand lens or via the eye, however under a microscope objective I was able to identify several types of organism, and get an initial estimate of population size. My first encounter was with the small single celled Paramecium aurella which were near the bottom of the tank, they move slowly and sporadically and seem to stay near a food source (Patterson, 185). Though there were only twenty estimated paramecium initially, it has shown the most growth throughout the experiment, and is therefore the chosen indicator species. Also on the bottom of the aquarium I found the anchoring protozoa Epistylis lacustris, grouped in a cluster of five or so. Moving towards the middle of the tank, there were Tachysoma pellionella rotifers, which moved in strange undulating movements, with a saw like projection occasionally moving (Lee, 460 and 553). I was able to spot some small Euglenoids, photosynthetic flagellates, along with various diatoms floating about. The uppermost portion of the tank was nearly barren of anything but plant life (Patterson, 66).

As an indicator species for my MicroAquarium, the paramecium takes a special focus and is analyzed further. The population multiplies by nearly a thousand times by the final week of observations, which means that the paramecium is an adaptable, hardy, and quickly reproducing organism. The organism is in the Eukaryotic Domain, Kingdom Protista, Phylum Ciliophora, Class Ciliatea, and order Peniculida (Patterson, 153). Simple genus and species is found to be Paramecium candatum, because of identifying traits of one nuclei and two small micronuclei, and two vacuoles (Patterson, 185). The surface is covered in dense cilia, which helps both to move and feed, propelling small bacteria into an opening. Though I was unable to catch a paramecium reproducing close enough to photograph, there were several areas which had diatoms and paramecium ‘husks’ littering, with what seemed to be paramecium undergoing mitosis on the outer edge. There is a photo of one of these areas in the tank after food had been added to boost activity. The life cycle of a paramecium occurs in two ways, the most common is meiosis of the micronuclei to produce four identical paramecia. Another way is for the nuclei to fuse after meiosis, where they undergo mitosis and division again to produce genetically varied offspring (The Smallest Page on the Web, Ciliates). This allows for the paramecium to reproduce under even strenuous circumstances.

Each week the organism populations rose, some more than others depending on which took advantage of the aquarium the specific week. A few organisms were found as populations grew, one was the small shapeless Saccamoeba fulvum, which avoided my eye early on because of its clear gel like form (Lee, 171). Also, an organism even smaller than the amoeba is an Actinosphaerum, which feeds and propels using its many water expelling vesicles, making it look like a clear sunburst (The Smalled Page on the Web, Sun Animalcules and Amoebas). Amongst the many different diatoms floating about in the aquarium I was able to identify a barrel like one which forms loose chains, it is of a type named M. Binderana (Vinyard, 92, 93). By the end of observations the populations had skyrocketed, and the communities had come to a peak and spread out to fill the entire aquarium. A final estimation of each identified population was recorded based on organisms in a given area. The findings are shown in the graph provided, and the trend is consistent across species for growth exponentially after food was added during the second week.

Discussion

After viewing a growing microscopic habitat for four weeks it is clear that diversity exists even in the most trivial of places. The exponential growth of the paramecium was much higher than could have been predicted, even fueled by the feed pellets, showing that given any ideal conditions protozoa life will multiply. Interaction between organisms and habitat was only beginning to show by the end of the observations, where colonies began to form around especially abundant moss growth. Also, as populations increased so did the size of the organisms, showing that the natural order of microorganisms may exist even in controlled situations. An interesting note may be made on the correlation with population booms and steep rise in diatom numbers. No large insect like or complex organisms appeared, thought I would hypothesize that given a different water source there could be any array of larger life. Even as the MicroAquarium observations have stopped, the life cycles taking place in the aquarium are most certainly repeating. The study of these small environments has helped to place a more realistic and pertinent view on the textbook study of a living cell.

Table Comparing Population Estimates of the MicroAquarium

Amoeba

Paramecium

Epistylis

Diatoms

Philodina

Tachysoma

Actinosphaerium

Euglenoids

Initial Count

2

20

5

100

10

20

2

30

Final

Count

10

1,000+

20

100,000+

50

250

50

300+

Images of MicroAquarium Organisms

Figure 1: A small single celled amoeba to the left of a tachysoma rotifer in movement.

Figure 2: One of many diatom blooms and paramecium breeding sites.

Figure 3: A paramecium and an actinosphaerium colliding, unsure which is being engulfed.


Works Cited

A MicroAquarium™ and MicroTerrarium to Discover Life. August 9, 2006. Paul G. Davison and University of North Alabama. November 22, 2008. .

“The Smallest Page on the Web.” An Introduction to Microscopy. Maurice Smith and David Walker. November 22, 2008.

Lee, J.J., Gordon F. Leedale, and Phyllis Bradbury. Illustrated Guide to the Protozoa. 2nd Ed. Indianapolis, Indiana: Wiley-Blackwell, 2000.

Patterson, D.J. Free-Living Freshwater Protozoa: A Color Guide. Indianapolis, IN : Wiley, 1996.

Vinyard, William. Diatoms of North America. Eureka, CA: Mad River Press, 1977.

Wednesday, November 19, 2008

Final Viewing of microaquarium

This final observation has concentrated on finding any new species, and also to give population estimates compared to initial findings.


I used the depth viewing Nikon microscope to view the fern-like plant material, where a colonization, or general concentration of paramecium and rotifers surrounded it. There were also very peculiar brown sacs litering the area, perhaps spores or nutrient piles? I estimate the final plant growth from the first week to be around 150%.

Looking at the bedrock I noticed a much greater density, where hyphae or root systems riddle the substrate. Ameoba and paramecium have become sparse now, the only existing ones are small, and come out to look for smaller organisms floating just above the substrate.

My final population estimate are as follows (based on counting life in an area and multiplying):

Ameoba 2/10
Paramecium 20/ 1,000+
Epistylis 5/ 20
Diatoms 100/ 100,000
Philodina 10/ 50
Tachysoma 20/ 250
Actinosphaerium 2/ 50
Euglenoids (green) 30/ 200+

Third Viewing 11/4/08

Initial look at the entire tank shows a dispersal of the organisms, probably because the food source was used up this past week, only twenty or so paramecium still exist in the feed area. Rotifers have multiplied in the middle area around green plant life mostly. Green life has skyrocketed, many root like systems are running through the water and substrate. The ball of what i suppose to be some sort of silicate, has become a bed of activity, it supports many algae colonies (green) and paramecium feeder colonies. On the busiest areas of plant and protozoa life I saw a few small fresh water aphids on leaces, identified as Aspidisca.



I took pictures of several interesting new creatures in the aquarium they are (From top left to bottom right): 1. Dinomeoba mirablis, a rigid protozoa 2. A collection (or graveyard) of diatoms and paramecium husks 3. A true amorphous ameoba compare din scale to a paramecium.

Tuesday, November 4, 2008

Second viewing

It looks like a completely different environment in the tank this week! Primarily because of the small food pellet used to help spur growth, this was seen by a mass of biological material (some moving ameobas and some not) at the top of the aquaria.

The paramecium population has skyrocketed to, as close as I can tell, over a hundred total. I also noticed a large increase in the number of rotifers, with some very striking sample of Philodina. These rotifers must have tripled or so in number, and seem to spread out in the middle area of the aquarium. Also in the middle layer, we see some Tachysoma rotifers, growing larger rather than more populous.

The bottom of the tank is almost like a material graveyard at this point, with a large amount of unidentifiable material along with many more diatoms. A new organism I noticed is a small, almost immobile ameoba called a Chilomonas.

Amidst the growing brown algae (noticeably), I found some filamentous green algae called oscillatoria.

Setting up and First View of Tank

My Microaquaria was filled with a local pond water, mixed with three different types of algae to promote growth and establishment of colonies.

The first voyage into the depths of the microaquarium was one of discovery, the populations of organisms was not proliferate, allowing for an easy count of populations which will grow through the next few weeks.

The top layer and middle layer were quite sparse in life, i did spot some small sunburst type organisms which look like Actinosphaerium. There were several floating paramecium also in the plant life.

The bottom (or primordial ooze as I call it) is where most life seems to be placed at this point. I counted a total of about ten parameciums. Five or so of these growths which attach to a bottom surface and float almost like seaweed called Epistylis. Also, I saw about three rotifers, relatively small, I did identify one large cyclops type. Amidst the dirt along the bottom I could also pick out some small photosynthetic Euglenoids, and a few diatoms with a barrel shape at the bottom (perhaps Binderana).